DCAI--AI & Childhood Cancer ...AP July 2025 - INTELLIGENCE ENGINEERING'S ALPHABET : World Class Biobrains: Drew Endy, Matt Scullin, Daniel Swiger++- BI BioIntelligence, the most collaborative human challenge Mother Earth has ever staged?
NB any errors below are mine alone chris.macrae@yahoo.co.uk but mathematically we are in a time when order of magnitude ignorance can sink any nation however big. Pretrain to question everything as earth's data is reality's judge
Its time to stop blaming 2/3 of humans who are Asian for their consciously open minds and love of education. Do Atlantic people's old populations still trust and celebrate capability of generating healthy innovative brains? What's clear to anyove visting Washington DC or Brussels is a dismal mismatch exists between the gamechanging future opportunities listed below and how freedom of next generation learning has got muddled by how old male-dominated generations waste money on adevrtising and bossing. Consider the clarity of Stanford's Drew Endy's Strange Competition 1 2:
Up to “60% of the physical inputs to the global economy”7 could be made via biotechnology by mid-century, generating ~$30 trillion annually in mostly-new economic activity. 8 Emerging product categories include consumer biologics (e.g., bioluminescent petunias,9 purple tomatoes,10 and hangover probiotics11 ), military hard power (e.g., brewing energetics12 ), mycological manufacturing (e.g., mushroom ‘leather’ 13 ), and biotechnology for technology (e.g., DNA for archival data storage14 ). Accessing future product categories will depend on unlocking biology as a general purpose technology15 (e.g., growing computers16 ), deploying pervasive and embedded biotechnologies within, on, and around us (e.g. smart blood,17 skin vaccines,18 and surveillance mucus19 ), and life-beyond lineage (e.g., biosecurity at birth,20 species de-extinction21 ).
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notes on drew endy testimony on bio tech 2025 strange competition

Natural living systems operate and manufacture materials with atomic precision on a planetary scale, powered by ~130 terawatts of energy self-harvested via photosynthesis

Biotechnology enables people to change biology. Domestication and breeding of plants and animals for food, service, and companionship began millennia ago. Gene editing, from recombinant DNA to CRISPR, is used to make medicines and foods, and is itself half-a-century old. Synthetic biology is working to routinize composition of bioengineered systems of ever-greater complexity

 https://colossal.com/  20 https://dspace.mit.edu/handle/1721.1/34914  19 https://2020.igem.org/Team:Stanford  18 https://med.stanford.edu/news/all-news/2024/12/skin-bacteria-vaccine.html  17 https://www.darpa.mil/news/2024/rbc-factory  16 https://www.src.org/program/grc/semisynbio/semisynbio-consortium-roadmap/  15 https://www.scsp.ai/2023/04/scsps-platform-panel-releases-national-action-plan-for-u-s-leadership-in-biotechnology/  14 https://dnastoragealliance.org/  13 https://www.mycoworks.com/  12 https://serdp-estcp.mil/focusareas/3b64545d-6761-4084-a198-ad2103880194  11  https://zbiotics.com/  10 https://www.norfolkhealthyproduce.com/  9 https://light.bio/     8 https://web.archive.org/web/20250116082806/https:/www.whitehouse.gov/wp-content/uploads/2024/11/BUILDIN G-A-VIBRANT-DOMESTIC-BIOMANUFACTURING-ECOSYSTEM.pdf  7 https://www.mckinsey.com/industries/life-sciences/our-insights/the-bio-revolution-innovations-transforming-econo mies-societies-and-our-lives     6 https://www.nationalacademies.org/our-work/safeguarding-the-bioeconomy-finding-strategies-for-understanding-ev aluating-and-protecting-the-bioeconomy-while-sustaining-innovation-and-growth   5 https://doi.org/10.1038/s41586-020-2650-9  

  4 https://www.nature.com/articles/s41467-023-40199-9

AIH- May 2025.Billion Asian womens end poverty networking 2006-1976 is most exciting case of Entrepreneurial Revolution (survey Xmas 1976 Economist by dad Norman Macrae & Romano Prodi). In 2007, dad sampled 2000 copies of Dr Yunus Social Business Book: and I started 15 trips to Bangladesh to 2018- many with apprentice journalists. This is a log of what we found - deepened after dad's death in 2010 by 2 kind remembrance parties hoist by Japan Embassy in Dhaka with those in middle of digital support of what happened next. We witnessed a lot of conflicts - i can try and answer question chris.macrae@yahoo.co.uk or see AI20s updates at http://povertymuseums.blogspot.com. I live in DC region but see myself as a Diaspoira Scot. Much of dad's libraries we transfreered with Dr Yunus to Glasgow University and enditirs og journals of social business, new economics and innovators of Grameen's virtual free nursing school.
Bangladesh offers best intelligence we have seen for sdgs 5 through 1 up to 2008, Search eg 4 1 oldest edu 4.6 newest edu ; .620th century intelligence - ending poverty of half world without electricity -although Keynes 1936 (last chapter General Theiory: Money, Interest, Employment) asked Economists to take hippocratic oath as the profession that ended extreme poverty, most economists have done the opposite. What's not understandable is how educators failed to catalogue the lessons of the handful who bottom-up empowered villages to collaboratively end poverty. There are mainly 2 inteligences to understand- Borlaug on food science -arguable the forst Biointeligence rising ar1950 on; fazle abed on everything that raised life expectancy in tropical village (zero-electricity) asia from low 40s to 60s (about 7 below norm of living with electricity and telecomes). Between 1972 and late 1990s, Abed's lessons catalogued in this mooc had largely built the nation of Bangladesh and been replicated with help of Unicef's James Grant acroo most tropical asian areas. What's exciting is the valley's mr ad mrs steve jobs invted Fazle Abed to share inteligences 2001 at his 65th birthday party. The Jobs and frineds promised to integrate abed's inteligence into neighborhod university stanfrd which in any event wanted Jobs next great leap the iphone. The Valley told abed to start a university so that women graduates from poor and rich nations could blend inteligence as Abed's bottom of the pyramid vilage began their journey of leapfrog modles now that grid infrastructures were ni longer needed for sdiar and mobile. Abed could also help redesign the millennium goals which were being greenwashed into a shared worldwide system coding frame by 2016. There at Abed's 80th birtday party , the easy bit was checking this mooc was uptodate. The hard bit - what did Abed mean by his wish to headhunt a Taiwanese American to head the university's 3rd decade starting 2020?

Monday, June 30, 2025

Grok says 30 september 2025 

Major AI "Factories" (Initiatives and Labs) Focusing on Childhood Blood Cancer

Childhood blood cancers, primarily acute lymphoblastic leukemia (ALL) and acute myeloid leukemia (AML), account for about 30% of pediatric malignancies. While no single "AI factory" (e.g., a massive industrial-scale data center like those for training general AI models) is exclusively dedicated to this, several leading AI-driven research initiatives, consortia, and labs are aggressively aggregating vast datasets and deploying AI for diagnosis, subtype classification, treatment personalization, and outcome prediction. These efforts leverage federated learning, deep learning on imaging/flow cytometry, and genomic/epigenomic analysis to connect sparse pediatric data.The most prominent is the National Cancer Institute's (NCI) Childhood Cancer Data Initiative (CCDI), which explicitly includes AI for pediatric blood cancers and stands out for its scale (harmonizing data from thousands of patients) and focus on real-time sharing. Below, I highlight the top ones based on scope, funding, and impact (up to September 2025), with CCDI as the leader.1. NCI Childhood Cancer Data Initiative (CCDI) – The Largest AI-Driven Ecosystem for Pediatric Cancers, Including Blood Cancers
  • Overview: Launched in 2019 with $500M+ over 10 years (doubled to $100M annually in 2025), CCDI creates a national "data factory" aggregating clinical, genomic, imaging, and survivorship data from ~every U.S. pediatric cancer patient. AI is core for harmonization, predictive modeling, and precision medicine.
  • Focus on Childhood Blood Cancer: Explicitly targets ALL and AML via the Molecular Characterization Initiative (MCI), which provides rapid genomic/epigenomic profiling (e.g., DNA methylation) for high-risk cases. By 2025, it includes 3,300+ leukemia samples in tools like the Acute Leukemia Methylome Atlas (ALMA), using AI to classify subtypes in hours (vs. weeks) and predict drug responses. Integrates with Children's Oncology Group (COG) trials for AI-optimized therapies.
  • AI Applications: Federated AI platforms for privacy-safe data sharing; machine learning for early detection from blood markers and flow cytometry; predictive models for relapse risk in ALL (AUC >0.95).
  • Impact: Enables AI training on rare subtypes (e.g., Ph-like ALL); supports 1,000+ researchers globally. Expanded in 2025 to non-COG sites for diverse data.
  • Why the Biggest?: Government-scale "factory" with 10+ years of funding, broadest data pool (10,000+ patients), and direct AI integration for all pediatric cancers, including blood types.
2. Broad Institute / Dana-Farber Cancer Institute's MARLIN Tool
  • Overview: A collaborative AI lab effort (2025 launch) using methylation patterns and neural networks for leukemia subtyping.
  • Focus on Childhood Blood Cancer: Analyzes 2,500+ samples (adults + pediatrics) to identify 38 methylation classes, with pediatric-specific models for ALL/AML. Achieves 98% accuracy in classifying childhood subtypes from biopsy data in ~2 hours.
  • AI Applications: Deep learning for epigenetic profiling; explainable AI (XAI) to interpret predictions for clinicians.
  • Impact: Speeds diagnosis for aggressive pediatric AML; integrates with CCDI for broader data access.
  • Scale: Backed by Broad's AI infrastructure (part of MIT/Harvard); potential for clinical rollout in 2026.
3. UNICA4EU / EU4CHILD Consortium (European AI for Childhood Cancer)
  • Overview: EU-funded (2022–2025, €10M+) project mapping AI applications across Europe, building a crowdsourced data ecosystem.
  • Focus on Childhood Blood Cancer: Prioritizes ALL/AML screening via AI on blood microscopy and genomics; developed tools like MIROR for rapid leukemia cell flagging.
  • AI Applications: Deep learning pipelines for classifying leukemia from flow cytometry (95%+ accuracy); federated learning for GDPR-compliant data sharing.
  • Impact: Covers 35,000 annual EU pediatric cases; influences global standards for AI in rare blood cancers.
  • Scale: Involves 20+ institutions (e.g., St. Anna Children's Cancer Research Institute); outputs open-source AI models.
Other Notable AI Labs and Tools
Initiative/Lab
Key Focus on Childhood Blood Cancer
AI Tech & Impact
Scale/Funding
YITU AI Research Institute for Healthcare (China)
End-to-end DL system for WBC classification in pediatric leukemia (19 cell types).
CNNs on bone marrow smears; 93%+ AP for ALL/AML detection. Speeds diagnosis in real clinics.
70% train/test split on 1,000+ samples; part of national AI health push.
UCLA Phenotypic Personalized Medicine (PPM) Platform
Optimizes chemo dosing for pediatric ALL using patient response data.
Parabola-based ML for drug personalization; reduces toxicity in relapsed cases (85% survival boost potential).
Multi-school collab; pending 2025 trials on 300+ patients.
University of Florida's Acute Leukemia Methylome Atlas (ALMA)
AI mapping of methylation in 3,300 leukemia samples for pediatric prognosis.
Neural nets predict 5-year survival; quick lab tests for subtypes.
UF Health-funded; pilot trials in 2025 for rare AML.
BeatAML Program (Multi-Institution)
AI drug screening for AML, including pediatric extensions.
ML on 451+ ex-vivo samples; predicts responders to 100+ drugs.
$40M+; integrates with CCDI for kid-focused models.
These "factories" address data silos in rare pediatric blood cancers by using AI to scale insights from limited samples. CCDI leads due to its ecosystem-wide approach, but collaborations (e.g., with CAIA from prior efforts) amplify reach. Progress is accelerating—e.g., 2025 funding boosts for AI in MCI. For specifics like accessing CCDI data, check cancer.gov/ccdi. If you meant something else by "age" or "factories," clarify!

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several prominent AI and technology leaders have made significant contributions to connecting and sharing data on childhood cancer. These efforts focus on creating shared platforms, federated data ecosystems, and AI-driven tools to aggregate clinical, genomic, imaging, and research data—addressing the rarity of pediatric cancers and accelerating diagnostics, treatments, and survivorship outcomes. Below, I'll outline the most notable ones based on recent developments (up to September 2025), emphasizing "connecting data" through collaboration, open-source resources, and secure sharing.1. National Cancer Institute (NCI) Childhood Cancer Data Initiative (CCDI)
  • Key Players: NCI Director W. Kimryn Rathmell (who oversees NCI's broader AI in cancer efforts) and the CCDI leadership team, including collaborators from St. Jude Children's Research Hospital and the Children's Oncology Group.
  • Contributions to Data Connection:
    • Launched in 2019 under President Trump's directive, CCDI builds a national ecosystem to collect, harmonize, and share data from every U.S. pediatric cancer patient, including electronic health records, genomic sequences, imaging, and long-term survivorship data.
    • Uses AI to analyze and integrate this data for predictive modeling, rare cancer insights, and personalized therapies. By 2025, it includes public repositories like The Cancer Imaging Archive (TCIA) with pediatric-specific datasets for brain tumors, lymphomas, and more.
    • In September 2025, the U.S. Department of Health and Human Services (HHS) doubled funding from $50M to $100M, explicitly emphasizing AI to maximize electronic health records and claims data for research and trials.
    • Federated API (launched with St. Jude) enables secure, privacy-preserving data sharing across institutions without centralizing sensitive info—marking one year of transforming pediatric data access in 2025.
  • Impact: Enables global researchers to query harmonized data, speeding up AI model training. For example, it supports tools for early detection of rare subtypes like medulloblastoma.
  • Why Most Significant?: As a government-led effort with AI at its core, it's the broadest in scope, involving hundreds of international collaborators and aiming for 10+ years of sustained data flow.
2. Cancer AI Alliance (CAIA)
  • Key Players: Tech giants AWS (Amazon), Microsoft, NVIDIA, and Deloitte; coordinated by Fred Hutch Cancer Center with partners like Dana-Farber (top-ranked in pediatric oncology) and Memorial Sloan Kettering.
  • Contributions to Data Connection:
    • Launched in October 2024 with $40M+ funding, CAIA creates a secure, federated platform to connect multimodal cancer data (including pediatric) across NCI-designated centers using responsible AI.
    • AWS committed $10M specifically for infrastructure to democratize access, including open datasets like NYUMets (metastatic brain cancer, relevant to kids) on the AWS Registry of Open Data.
    • Focuses on rare cancers and small populations by enabling rapid, privacy-safe data aggregation—e.g., AI to identify trends in pediatric solid tumors that individual centers couldn't detect alone.
    • Expanding in 2025 to include more centers, with AI tools for genomic and imaging analysis.
  • Impact: Shifts from siloed research to collaborative AI models, improving outcomes for understudied childhood cancers like sarcomas.
  • Why Most Significant?: Directly involves AI hardware/software leaders, providing the computational backbone for data connection at scale.
3. UNICA4EU and EU4CHILD Projects
  • Key Players: European Commission-funded consortium (e.g., St. Anna Children's Cancer Research Institute, involving AI experts like Peter Zöscher and Simon Gutwein).
  • Contributions to Data Connection:
    • UNICA4EU (2022–2024) mapped AI applications for childhood cancer, creating a "paediatric innovation roadmap" with harmonized data from EU registries, EHRs, and social determinants of health.
    • Builds on EU4CHILD pilot for crowdsourced data ecosystems; uses AI to integrate diverse sources (e.g., imaging from MRI scans) while complying with GDPR and the EU Data Act.
    • Developed tools like MIROR (AI for faster MRI analysis of brain tumors) and cell-flagging AI to speed diagnostics from weeks to days.
  • Impact: Facilitates cross-border data sharing for AI-driven precision medicine, targeting Europe's 35,000 annual pediatric cases.
  • Why Most Significant?: Emphasizes regulatory-compliant data connection in a fragmented EU landscape, influencing global standards.
Other Notable Efforts
Initiative/Leader
Focus on Data Connection
Key Outcome
OpenAI (Sam Altman) with Color Health
AI assistant (GPT-4o-based) analyzes patient records and guidelines for personalized pediatric cancer plans, flagging screening gaps. Announced June 2024.
Improves data-driven care access; potential for broader EHR integration.
Children's Brain Tumor Network (CBTN)
Shared imaging protocol database for 4,900+ patients, enabling AI training on pediatric brain tumors.
Overcomes data scarcity for DL-CNN models distinguishing tumor subtypes.
Hudson Institute's Childhood Cancer Model Atlas (CCMA)
Open-source bank of tumor samples with AI data-mining tools for global testing. Featured in Cancer Cell (2024).
Accelerates vulnerability identification for CNS and solid tumors.
These initiatives demonstrate a surge in momentum, especially post-2024, driven by AI's ability to handle sparse pediatric data. NCI's CCDI stands out as the "most" comprehensive due to its national scale, funding boost, and direct AI integration for every patient. For deeper dives, resources like the CCDI Hub or CAIA's platform are publicly accessible. If you'd like details on a specific one, let me know!